comparative genomics

Perform comparative genomics to compare genomes across different species or strains

compare_genome_size

Compares the size of two genomes and reports the differences.

Usage:

import GenBioX.comparative_genomics as ca

ca.compare_genome_size(genome1, genom)

Identifies conserved regions between two or more genomes

Usage:

ca.identify_conserved_regions(genomes)

Calculates the pairwise identity between two sequences.

Usage:

ca.pairwise_identity(seq1, seq2, method='global')

Calculates the phylogenetic distance between two genomes.

Usage:

ca.phylogenetic_distance(genome1, genome2)