Statistical Analysis

The statistical_analysis module provides functions for statistical analysis of sequences.

calculate_gc_content

calculates the GC content of a nucleotide sequence.

Usage:

gc_count = sa.calculate_gc_content(sequence)
print(gc_count)

counts the number of A, C, G, and T (or U) nucleotides in a nucleotide sequence.

Usage:

count = sa.count_nucleotides(sequence)
print(count)

generates the reverse complement of a nucleotide sequence

Usage:

rev_comp = sa.reverse_complement(sequence)
print(rev_comp)

translates a nucleotide sequence into a protein sequence using the standard genetic code.

Usage:

seq = sa.translate(sequence)
print(seq)